logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002108_54|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002108_01595
TonB-dependent receptor SusC
TC 1578 4595 + 1.B.14.6.1
MGYG000002108_01596
SusD-like protein
STP 4645 6261 + TPR_2
MGYG000002108_01597
hypothetical protein
CAZyme 6407 8167 + GH30_4| GH30
MGYG000002108_01598
hypothetical protein
CAZyme 8175 9737 + GH30_4| GH30
MGYG000002108_01599
hypothetical protein
CAZyme 9940 12312 + GH35| CBM32
MGYG000002108_01600
Retaining alpha-galactosidase
CAZyme 12850 14823 + GH97
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is beta-fucosides

Protein ID eCAMI subfam CAZyme substrate
MGYG000002108_01597 GH30_e7|3.2.1.38 beta-fucosides
MGYG000002108_01598 GH30_e50|3.2.1.38 beta-fucosides
MGYG000002108_01599 GH35_e29|CBM32_e73
MGYG000002108_01600 GH97_e10|3.2.1.88|3.2.1.22 alpha-glucan

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig


Genomic location